PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01002636G0200
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bHLH
Protein Properties Length: 271aa    MW: 29565.1 Da    PI: 6.1716
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01002636G0200genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.90.00013886254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     +  + erE+  Rd++N+ f eL  +l  +     + + Ka iL+ +++ +++L
  PH01002636G0200 38 KIHKAEREKLKRDQLNDIFGELGNMLEAD----RQSNGKACILTDTTRILRDL 86
                     567889********************997....57788889999888888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.3E-933106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-1134106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.0043686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MVPAERGNVA AAISTAAAEK LVHGPISDKK CQKKAPKKIH KAEREKLKRD QLNDIFGELG  60
NMLEADRQSN GKACILTDTT RILRDLLSQV ESLRQENDTL QNESHYVTME RNELQDENGV  120
LRNEISELKN ELSLRLAGNP GWGHGTTGSP LPVPHSSSTQ FPSQQPMQPP TITSTAFPLQ  180
LPLQQPTVIG HSYAAPPREL KLFPEAVSVQ GLESSEDQEA PNHVARPQAR YPTQAASWPV  240
SLGLPRMEDA QCSSSTTSSS KEASTGRDFE *
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0996070.0FP099607.1 Phyllostachys edulis cDNA clone: bphyem113a20, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003557817.11e-143PREDICTED: transcription factor bHLH47
TrEMBLI1H5061e-143I1H506_BRADI; Uncharacterized protein
STRINGBRADI1G61110.11e-143(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24813884
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.32e-26bHLH family protein